Chapter 9 Function and variable index

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Index Entry

 

Section

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.

.C:

 

Interface functions .C and .Fortran

.Call:

 

Handling R objects in C

.Call:

 

Calling .Call

.External:

 

Handling R objects in C

.External:

 

Calling .External

.Fortran:

 

Interface functions .C and .Fortran

.Last.lib:

 

Load hooks

.onAttach:

 

Load hooks

.onDetach:

 

Load hooks

.onLoad:

 

Load hooks

.onUnload:

 

Load hooks

.Random.seed:

 

Random numbers

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\

\acronym:

 

Marking text

\alias:

 

Documenting functions

\arguments:

 

Documenting functions

\author:

 

Documenting functions

\bold:

 

Marking text

\cite:

 

Marking text

\code:

 

Marking text

\command:

 

Marking text

\concept:

 

Indices

\cr:

 

Sectioning

\CRANpkg{pkg}:

 

User-defined macros

\deqn:

 

Mathematics

\describe:

 

Lists and tables

\description:

 

Documenting functions

\details:

 

Documenting functions

\dfn:

 

Marking text

\doi{numbers}:

 

User-defined macros

\dontrun:

 

Documenting functions

\dontshow:

 

Documenting functions

\dots:

 

Insertions

\dQuote:

 

Marking text

\email:

 

Marking text

\emph:

 

Marking text

\enc:

 

Insertions

\enumerate:

 

Lists and tables

\env:

 

Marking text

\eqn:

 

Mathematics

\examples:

 

Documenting functions

\figure:

 

Figures

\file:

 

Marking text

\format:

 

Documenting data sets

\href:

 

Marking text

\if:

 

Conditional text

\ifelse:

 

Conditional text

\itemize:

 

Lists and tables

\kbd:

 

Marking text

\keyword:

 

Documenting functions

\ldots:

 

Insertions

\link:

 

Cross-references

\method:

 

Documenting functions

\name:

 

Documenting functions

\newcommand:

 

User-defined macros

\note:

 

Documenting functions

\option:

 

Marking text

\out:

 

Conditional text

\packageAuthor:

 

User-defined macros

\packageDescription:

 

User-defined macros

\packageDESCRIPTION:

 

User-defined macros

\packageIndices:

 

User-defined macros

\packageMaintainer:

 

User-defined macros

\packageTitle:

 

User-defined macros

\pkg:

 

Marking text

\preformatted:

 

Marking text

\R:

 

Insertions

\RdOpts:

 

Dynamic pages

\references:

 

Documenting functions

\renewcommand:

 

User-defined macros

\S3method:

 

Documenting functions

\samp:

 

Marking text

\section:

 

Sectioning

\seealso:

 

Documenting functions

\Sexpr:

 

Dynamic pages

\source:

 

Documenting data sets

\sQuote:

 

Marking text

\sspace:

 

User-defined macros

\strong:

 

Marking text

\tabular:

 

Lists and tables

\title:

 

Documenting functions

\url:

 

Marking text

\usage:

 

Documenting functions

\value:

 

Documenting functions

\var:

 

Marking text

\verb:

 

Marking text

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A

allocVector:

 

Allocating storage

AUTHORS:

 

Package subdirectories

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B

bessel_i:

 

Mathematical functions

bessel_i:

 

Mathematical functions

bessel_j:

 

Mathematical functions

bessel_j:

 

Mathematical functions

bessel_k:

 

Mathematical functions

bessel_k:

 

Mathematical functions

bessel_y:

 

Mathematical functions

bessel_y:

 

Mathematical functions

beta:

 

Mathematical functions

beta:

 

Mathematical functions

BLAS_LIBS:

 

Using Makevars

browser:

 

Browsing

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C

Calloc:

 

User-controlled memory

CAR:

 

Calling .External

CDR:

 

Calling .External

cgmin:

 

Optimization

choose:

 

Mathematical functions

choose:

 

Mathematical functions

CITATION:

 

Package subdirectories

CITATION:

 

Preparing translations

COPYRIGHTS:

 

The DESCRIPTION file

COPYRIGHTS:

 

Package subdirectories

cospi:

 

Numerical Utilities

cPsort:

 

Utility functions

---

D

debug:

 

Debugging R code

debugger:

 

Debugging R code

defineVar:

 

Finding and setting variables

digamma:

 

Mathematical functions

digamma:

 

Mathematical functions

dump.frames:

 

Debugging R code

duplicate:

 

Named objects and copying

dyn.load:

 

dyn.load and dyn.unload

dyn.unload:

 

dyn.load and dyn.unload

---

E

expm1:

 

Numerical Utilities

export:

 

Specifying imports and exports

exportClasses:

 

Namespaces with S4 classes and methods

exportClassPattern:

 

Namespaces with S4 classes and methods

exportMethods:

 

Namespaces with S4 classes and methods

exportPattern:

 

Specifying imports and exports

exportPattern:

 

Namespaces with S4 classes and methods

exp_rand:

 

Random numbers

---

F

FALSE:

 

Mathematical constants

findInterval:

 

Utility functions

findInterval2(double*:

 

Utility functions

findVar:

 

Finding and setting variables

FLIBS:

 

Using Makevars

fmax2:

 

Numerical Utilities

fmin2:

 

Numerical Utilities

fprec:

 

Numerical Utilities

Free:

 

User-controlled memory

fround:

 

Numerical Utilities

fsign:

 

Numerical Utilities

ftrunc:

 

Numerical Utilities

---

G

gammafn:

 

Mathematical functions

gammafn:

 

Mathematical functions

gctorture:

 

Using gctorture

getAttrib:

 

Attributes

getCharCE:

 

Character encoding issues

GetRNGstate:

 

Random numbers

---

I

imax2:

 

Numerical Utilities

imin2:

 

Numerical Utilities

import:

 

Specifying imports and exports

importClassesFrom:

 

Namespaces with S4 classes and methods

importFrom:

 

Specifying imports and exports

importMethodsFrom:

 

Namespaces with S4 classes and methods

install:

 

Attributes

iPsort:

 

Utility functions

ISNA:

 

Missing and special values

ISNA:

 

Missing and IEEE values

ISNAN:

 

Missing and special values

ISNAN:

 

Missing and IEEE values

---

L

LAPACK_LIBS:

 

Using Makevars

lbeta:

 

Mathematical functions

lbeta:

 

Mathematical functions

lbfgsb:

 

Optimization

lchoose:

 

Mathematical functions

lchoose:

 

Mathematical functions

lgamma1p:

 

Numerical Utilities

lgammafn:

 

Mathematical functions

lgammafn:

 

Mathematical functions

library.dynam:

 

Package subdirectories

library.dynam:

 

dyn.load and dyn.unload

log1p:

 

Numerical Utilities

log1pexp:

 

Numerical Utilities

log1pmx:

 

Numerical Utilities

logspace_add:

 

Numerical Utilities

logspace_sub:

 

Numerical Utilities

logspace_sum:

 

Numerical Utilities

---

M

mkChar:

 

Handling character data

mkCharCE:

 

Character encoding issues

mkCharLen:

 

Handling character data

mkCharLenCE:

 

Character encoding issues

M_E:

 

Mathematical constants

M_PI:

 

Mathematical constants

---

N

NA_REAL:

 

Missing and IEEE values

NEWS.Rd:

 

Package subdirectories

nmmin:

 

Optimization

norm_rand:

 

Random numbers

---

O

OBJECTS:

 

Using Makevars

OBJECTS:

 

Creating shared objects

---

P

pentagamma:

 

Mathematical functions

pentagamma:

 

Mathematical functions

PKG_CFLAGS:

 

Creating shared objects

PKG_CPPFLAGS:

 

Creating shared objects

PKG_CXXFLAGS:

 

Creating shared objects

PKG_FCFLAGS:

 

Creating shared objects

PKG_FFLAGS:

 

Creating shared objects

PKG_LIBS:

 

Creating shared objects

PKG_OBJCFLAGS:

 

Creating shared objects

PKG_OBJCXXFLAGS:

 

Creating shared objects

prompt:

 

Rd format

PROTECT:

 

Garbage Collection

PROTECT_WITH_INDEX:

 

Garbage Collection

psigamma:

 

Mathematical functions

psigamma:

 

Mathematical functions

PutRNGstate:

 

Random numbers

---

Q

qsort3:

 

Utility functions

qsort4:

 

Utility functions

---

R

R CMD build:

 

Building package tarballs

R CMD check:

 

Checking packages

R CMD config:

 

Configure and cleanup

R CMD Rd2pdf:

 

Processing documentation files

R CMD Rdconv:

 

Processing documentation files

R CMD SHLIB:

 

Creating shared objects

R CMD Stangle:

 

Processing documentation files

R CMD Sweave:

 

Processing documentation files

Rdqagi:

 

Integration

Rdqags:

 

Integration

Realloc:

 

User-controlled memory

recover:

 

Debugging R code

reEnc:

 

Character encoding issues

REprintf:

 

Printing

REPROTECT:

 

Garbage Collection

REvprintf:

 

Printing

revsort:

 

Utility functions

Riconv:

 

Re-encoding

Riconv_close:

 

Re-encoding

Riconv_open:

 

Re-encoding

Rprintf:

 

Printing

Rprof:

 

Profiling R code for speed

Rprof:

 

Memory statistics from Rprof

Rprofmem:

 

Tracking memory allocations

rPsort:

 

Utility functions

rsort_with_index:

 

Utility functions

Rvprintf:

 

Printing

R_addhistory:

 

Setting R callbacks

R_alloc:

 

Transient storage allocation

R_allocLD:

 

Transient storage allocation

R_Busy:

 

Setting R callbacks

R_ChooseFile:

 

Setting R callbacks

R_CleanUp:

 

Setting R callbacks

R_ClearErrConsole:

 

Setting R callbacks

R_csort:

 

Utility functions

R_dataentry:

 

Setting R callbacks

R_dataviewer:

 

Setting R callbacks

R_EditFile:

 

Setting R callbacks

R_EditFiles:

 

Setting R callbacks

R_ExpandFileName:

 

Utility functions

R_FINITE:

 

Missing and IEEE values

R_FlushConsole:

 

Setting R callbacks

R_forceSymbols:

 

Registering native routines

R_GetCCallable:

 

Linking to native routines in other packages

R_GetCurrentSrcref:

 

Accessing source references

R_GetSrcFilename:

 

Accessing source references

R_INLINE:

 

Inlining C functions

R_IsNaN:

 

Missing and IEEE values

R_isort:

 

Utility functions

R_LIBRARY_DIR:

 

Configure and cleanup

R_loadhistory:

 

Setting R callbacks

R_max_col:

 

Utility functions

R_NegInf:

 

Missing and IEEE values

R_orderVector:

 

Utility functions

R_orderVector1:

 

Utility functions

R_PACKAGE_DIR:

 

Configure and cleanup

R_PACKAGE_NAME:

 

Configure and cleanup

R_ParseVector:

 

Parsing R code from C

R_PosInf:

 

Missing and IEEE values

R_pow:

 

Numerical Utilities

R_pow_di:

 

Numerical Utilities

R_PreserveObject:

 

Garbage Collection

R_qsort:

 

Utility functions

R_qsort_I:

 

Utility functions

R_qsort_int:

 

Utility functions

R_qsort_int_I:

 

Utility functions

R_ReadConsole:

 

Setting R callbacks

R_RegisterCCallable:

 

Linking to native routines in other packages

R_registerRoutines:

 

Registering native routines

R_ReleaseObject:

 

Garbage Collection

R_ResetConsole:

 

Setting R callbacks

R_rsort:

 

Utility functions

R_savehistory:

 

Setting R callbacks

R_selectlist:

 

Setting R callbacks

R_ShowFiles:

 

Setting R callbacks

R_ShowMessage:

 

Setting R callbacks

R_Srcref:

 

Accessing source references

R_Suicide:

 

Setting R callbacks

R_tmpnam:

 

Utility functions

R_tmpnam2:

 

Utility functions

R_useDynamicSymbols:

 

Registering native routines

R_Version:

 

Platform and version information

R_WriteConsole:

 

Setting R callbacks

R_WriteConsoleEx:

 

Setting R callbacks

---

S

S3method:

 

Registering S3 methods

SAFE_FFLAGS:

 

Using Makevars

samin:

 

Optimization

seed_in:

 

Random numbers

seed_out:

 

Random numbers

setAttrib:

 

Attributes

setVar:

 

Finding and setting variables

sign:

 

Numerical Utilities

sinpi:

 

Numerical Utilities

summaryRprof:

 

Memory statistics from Rprof

system:

 

Operating system access

system.time:

 

Operating system access

system2:

 

Operating system access

S_alloc:

 

Transient storage allocation

S_realloc:

 

Transient storage allocation

---

T

tanpi:

 

Numerical Utilities

tetragamma:

 

Mathematical functions

tetragamma:

 

Mathematical functions

trace:

 

Debugging R code

traceback:

 

Debugging R code

tracemem:

 

Tracing copies of an object

translateChar:

 

Character encoding issues

translateCharUTF8:

 

Character encoding issues

trigamma:

 

Mathematical functions

trigamma:

 

Mathematical functions

TRUE:

 

Mathematical constants

---

U

undebug:

 

Debugging R code

unif_rand:

 

Random numbers

UNPROTECT:

 

Garbage Collection

UNPROTECT_PTR:

 

Garbage Collection

untracemem:

 

Tracing copies of an object

useDynLib:

 

useDynLib

---

V

vmaxget:

 

Transient storage allocation

vmaxset:

 

Transient storage allocation

vmmin:

 

Optimization

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